Browse of TCMCG006C83970 protein

CDS

Accession Number	TCMCG006C83970
gbkey	CDS
Protein Id	XP_013688577.1
Location	complement(join(70530389..70530533,70530635..70530779,70530861..70531011,70531126..70531635,70531819..70531977,70532074..70532469,70532545..70535021,70535123..70536670,70537160..70537393,70537539..70537712,70537792..70537920,70538286..70538463,70538556..70538771,70538872..70538956,70539528..70539643,70539923..70540109,70540214..70540366,70540505..70540539))
Gene	LOC106392309
GeneID	106392309
Organism	Brassica napus

Protein

Length	2345aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013833123.2
Definition	piezo-type mechanosensitive ion channel homolog isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	S
Description	Piezo-type mechanosensitive ion channel homolog
KEGG_TC	1.A.75.1
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko02000        [VIEW IN KEGG] ko04131        [VIEW IN KEGG]
KEGG_ko	ko:K22128        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005216        [VIEW IN EMBL-EBI] GO:0005261        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006811        [VIEW IN EMBL-EBI] GO:0006812        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008324        [VIEW IN EMBL-EBI] GO:0008381        [VIEW IN EMBL-EBI] GO:0009581        [VIEW IN EMBL-EBI] GO:0009582        [VIEW IN EMBL-EBI] GO:0009605        [VIEW IN EMBL-EBI] GO:0009612        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0015075        [VIEW IN EMBL-EBI] GO:0015267        [VIEW IN EMBL-EBI] GO:0015318        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0022803        [VIEW IN EMBL-EBI] GO:0022836        [VIEW IN EMBL-EBI] GO:0022838        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0022890        [VIEW IN EMBL-EBI] GO:0034220        [VIEW IN EMBL-EBI] GO:0042391        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0050982        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051606        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065008        [VIEW IN EMBL-EBI] GO:0071214        [VIEW IN EMBL-EBI] GO:0071260        [VIEW IN EMBL-EBI] GO:0071496        [VIEW IN EMBL-EBI] GO:0098655        [VIEW IN EMBL-EBI] GO:0104004        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTCTCGCTTTTCAGAGCTTTTCGAGCAGCTAGTCATCTTAGGGTTGCCTCCTGCTTGTTGTTACCAGCTGTTCAATTGGCACTGGGAATTTGCAATCCTTCTTGGGTCTCTTTGCCATTTTTTGTTGGCAGCTGTGCTGGTCTTGTGGACTGGTCCTTGACAAGCAACGTTTCAGGACTTTTCAGGTGGTGGAGAGTTCTTTATATCTACGCAGCATTCAACATTGTCCTACTTTACCTCTATCAACTACCAATAAACTTCTCCGATATGATTCGATGGATAGCAAGCTTTATAGGTCTATTCAGAATCTCTGCGGAAACAGAAGGCACTGATATTTGTTCTGGTCTTTTCCTTTTGCTTTTTTACACCATGCTATCCTATATAAGGTCAGACCTCGAGGATATGGATTTTATCATGTCGACGAGTGAAAATAACTTGGCAGAGCGTCTTCTTCCTCCAAAATATTCGTTTTTTATTCGAGAATCAAGGGCCGGTGTTAGGCACACCAATGTTTTACTGAGGGGAGCTGTGTTTAAGACCTTCAGTATCAATTTCTTCACATATGGTTTCCTGGTCTCTCTGTTTGCTCTTTCGTTCTGGAGTTTTCATTTTGCGAGCTTGTGTGCTTTTGGCCTCCTTGCATATGTTGGTTACATTATCTATGCCTTCCCATCGTTGTTCCGCTTGCACAGATTAAACGGCCTTCTGCTTGTATTTATACTCTTATGGGCTGTCAGTACGTACATATTCAATGTAGCATTTTCTTTTCTGAACACTAAGGCTGGAAAGGACATGAAAATTTGGGAGATGGTGGGACTTTGGCATTACACTATACCTGGATTCTTTTTGCTTGCACAATTTGGTTTGGGAATGTTGGTTGCGTTGGGTAATCTTGTGAACAACTCTGTTTTTCTCTACCTGTCTGAAGAGAGCTCCAGATCTTCCAATGACAGATCTTATGCTGAAGCTGATGAAGAAACAAAGGTTTTGGTTGTCGCAACCATTGCTTGGGGATTGCGGAAATGTTCACGGGCTATTATGCTCGCACTGATTTTCCTCATTGCCATGAAACCTGGGTTTGTCCATGCAGTGTATGTGATATTCTTCCTTATGTATCTGCTGAGCCACAACATCAACAGAAAGATACGCAAGTCACTGATTCTTCTATGCGAAGTTCATTTTGCACTTCTCTACATTCTTGAGATCGACCTTGTGTCGAACTCCTTAAAGCGGCAAGGCTCTGTGAGCAGGGAAATTCTGTTTCAGTTAGGTCTTCTTAGGTCTGAAAGCTCTTGGGACTTCTTGGAGATAGCCTTGCTTGCTTGCTTCTGTGCTATCCATAATCATGGTTTTGAGGTGCTATTTTCCTTCTCAGCAATTGTACGACACACACCAAGCCCTCCAATTGGATTTAGCATATTGAAAGCTGGTCTCAACAAATCAGTTCTCTTGTCCGTCTACTCATCGCCATCTTCAAGTTATAGCCAGGATAATACTACTTATGAGAGACACATTGCTTCATTTCTGAGTGCGATTGGGCAAAAGTTTCTGTCTATGTACCGATCATGTGGAACATACATTGCCTTCATCACTATTCTCATAAGTGTATACCTGGTGAAACCCAATTATGTATCGTTTGGATACATTTTCCTTCTCTTGTTCTGGATTACTGGAAGACAAATGTTTGAGGAAACTAAGAGACGCTTGTGGTTCCCTTTGAAAGCATATGCGGTTTTGGTGTTTATGTTTATCTACTGCTTAAGTAGCTTTGTCAGCTTCCAGCTCTGGTTATCTGGATATATTGATCTATACTTTTATTTAGGTTACAACTCCGAAGCACCATTGCTGGATAATGTATGGGAATCTCTTGCTGTGTTGATCGTGATGCAACTTTACAGCTATGAAAGGAGGCAGAATGGACATTACATTCCAGGTCAATCTAGTTTGGTTCATCCTGGAGTTTTTGGTTTTCTTGAGAGGTTTTTGGTATGGCATGGTCAGAAGATCTTGTTCGCGGCATTATTTTATGCATCATTGTCTCCAATCAGTGTGTTTGGATTTGTGTATCTCCTCGGCCTTGTCATCTGCACAACCTTCCCAAAGTCCTCTTCAGTACCATCCAAATCATTTTTGATCTATACTGGATTTCTCGTGTCTGCTGAGTATCTTTTCCAACTGTGGGGCATGCAAGCTCAAATGTTCCCTGGGCAAAGATATGCTGAGTTGTCTTTCTACTTGGGCCTTCGAGTATATGAACCTGGATTTTGGGGTATAGAATCGGGTCTACGAGGCAAAGTGCTAGTTGTTGCTGCCTGTACTCTGCAGTACAATGTATTTCGTTGGCTAGAAAGGACACCTGGTTTAACTATTATGAAAGGAAAATATGAAGAGCCTTGTCCCCTATTTGTCTCTGCAGAAGACACAACTGCAAGTGTTTCCAGTTCTAATGGTGAAACCCCATCTTCCATAGATCATGCTTCTATATCAATTAAACAAGGCGAGGCTACTAGTAACTCATGGCCTTTCTTCTCTCCCCGTGATAATCAGGCAGCTGGTTTCTTGCATCCCAAGACTGGAGGCTCCGAAAGTGGCAGTAGTAAGAAATTTTCATTTGGTCATTTCTGGGGAAGCATCAAAGAGAGTCACAAGTGGAACAAGAGGCGGATTCTGGCATTGAAGAAGGAGAGGTTTGAAATGCAGAAGAATCTGTTAAATATTTACTTGAAGTTTTGGATTGAGAACATGTTTAACCTCTATGGCCTTGAGATAAACATGATAGCGCTGCTTCTTGCAAGTTTTGCTTTGCTGAATGCCATCTCCTTGGTATATATTGCGCTGCTTGCTGCGTGTGTCCTCTTGAGAAGACGCCTAATTCAGAAACTATGGCCTGTCGTTGTTTTTCTGTTTGCATCAATTCTAGCAATTGAATACGTTGCCACGTGGAATAACTTATTGCCTTTAGATCAGGATCCAAGTGAAACTAGCGTGCATTGCCATGATTGCTGGAGTATTGCAGCTGTCTACTTAAAATTTTGCCGGGACTGCTGGCTGGGAGTGAGAGTTGACGATCCCCGGACCCTTATTAGCTATTTCGTGGTGTTCATGCTTGCCTGTTTTAAACTTCGGGCTGATCAGATATCTAGTTTCTCAGAGTCATCGACATATCATCAGATGAAGTCTCAGAGAAAGAACTCATTTGTCTGGAGAGATCTCTCCTTCGAAACAAAGAGCATGTGGACCGTGCTTGATTACCTGAGGCTTTATTGTTACGTCCATCTGTTGGATGTTGTGCTTATTCTGATTCTAATCACAGGAACTCTCGAGTATGACATTCTACACCTGGGCTATCTTGCATTCGCACTTGTTTTTGCCCGGATGCGACTTGAAATACTGAAGAAGAAGAACAAAATATTCAGGTTTTTGCGGGTGTACAATTTTGTTCTCATCATCTTTTCTCTCGCATATCAGTCTCCATTTGTTGGAAACTTCAATGATGGGAAGTGTGAAACGGTTGATTATATTTACGAGGTGATTGGATTTTACAAGTATGACTACGGGTTTCGAATCACTGCAAGATCTGCTCTCGTTGAGATCATCATATTTATGTTAGTATCTCTTCAGTCCTACATGTTTTCCTCCCAGGAATTTGATTATGTCTCGCGGTATCTTGAAGCGGAGCAAATTGGTGCTATTGTGCGGGAGCAAGAGAAGAAAGCTGCACGGAAAACCGAGCAACTGCAACAGATTCGTGAGGCTGAAGAAAAGAAACGGCAGCGGAATTTGCAGGTGGAAAAGATGAAGTCGGAAATGCTGAACCTGCGGGTACAGCTTCACAGAATGAATTCTGATTCTAATTTTGGGTTTGCTTCTCCGCGCACTGAAGGTCTACGAAGGAGGAGTTCGTATCTAATTCCAGATAGTGGTGCAGCCAGTCCGGAGATTGACGGAGTGGTCCACAGGAAAGAAGGCCAGCCTATTGACGAGGATCCACATTATCCTTTTGAAGCTCATGAGCTTCCTATGAGTGCCACTCCAGAAGCACCAGATTCTCCAGAGTGTTCATTTGGAGCATCTCCTTGTGAGATCACTGAAATTCAACACAATACTGATGTCATGTCTACGGAGCGTGAAATAAAAGATAAGTCAGAAGGAAAAGATAATCCCTTGATTTCTGCTGTGCAACTCATCGGTGATGGTGTTTCCCAGGTGCAATTTATTGGAAATCAGGCAGTAAATAACCTTGCGAATTTCTTAAACATCTCACCAGAAAATTCAGATATAAATGAGCAGTCCTCTGTTGATGATGAGGTGTATGATGAGATGGAAAGCCAGAATAGAATACACAAACCTTTTGAACGGTCAACATCTCTACAGTCTGACAGGAGTAGTGATGGCACTAGCTTTCAGATAGGAAGGATCCTTCGTCATATATGGTCTAGGATGCAGTCCAACAATGATATTGTTTGCTATTGCTGCTTCATTATTGCGTTTCTGTGGAACTTCAGTCTTCTTTCCATGGTCTATCTAGCAGCGCTGTTCCTATATGCCCTCTGCGTTCACACTGGACCTACTCACATCTTCTGGGTCGTCATGCTAATGTACACAGAAATCTATATCCTCCTCCAGTACTTATACCAGATTATAATCCAGCACTGTGGGTTGAGTATTGACGCACCACTTCTTCAAGAACTGGGATTTCCAACGCAAAGAATCAAATCATCTTTTGTTGTCAGCTCGTTGCCTCTCTTCCTTGTTTATATATCCACTCTCATACAGAGTGTTATAACAGTGAAAGATGGTGACTGGGTTCCTTCTGCTGATTTTGCTTCTCGCCGGAATGCCCGTGGGAGCCAGAAGGACCTTACAAGAATTAACTGGAGCCTGAGAGTTTGGGACGTGTACAAGAAGCTGAGAGATGGTGTGAAATTGGTGATCAGAAGCATGTACCGGTACTGGATCTCTCTGACACGTGGAGCAGAATCCCCTCCTTACTTTGTTCAGGTGACAATGGATGTTCACATGTGGCCTGAAGATGGAATTCAACCTGAAAGAGTTGAATGCAGAATGAATCAGTTACTTAGGCTTGTCCATAATGAGAGATGCGAGAAGGGAAACCCTGATCTTTGTCCTTACTCTAGCAGGGTCCACGTACAAAGTATTGAGAGAAGTACAGAGACCCCAAACGAGGCCTTGGTTGTTCTCGAGGTTGAGTACGCGTCTCCCACGAATGGGTGTTCTACAGCAGAATGGTACAAATCACTAACCCCAGCCTCGGATGTGGCGAAAGAGATTCGTAAAGCTCAACATAGTGGACTTGGTGAAGGAACTGGGTTTCCGTACCCCATTCTCTCTGTGATTGGCGGAGGAAAGAGAGAAACAGACCTCTATGCCTACATATTTGGTGCTGATTTGATGGTCTTCTTTCTGGTTGCCATTTTCTACCGATCCGTCATCAAAAATAAAAGCGAGTTTATCGATGTATATCAGCTAGTGGACCAGTTCCCATTTGACTTTGTCATTATTCTAATGGTTATCTTCTTCCTGATTGTTGTTGATCGGGTCATCTATCTTTGCTCCTTTGCGACTGGAAAAGTGGTGTACTACCTCTTCAGTCTTATTCTCTTCACATATGCAGTGACAGAGTATGCTTGGAGCATATATCCTACGCAGCAGCATGCTGCTGGCTTGGCTCTCAGATTCATATTTCTTGCCAAAGCAATGTCACTAGCTCTCCAGGCCATACAAATCCGCTATGGGCTACCTCATAAGAGCACCTTATATCGGCAGTTTTTGACAAGTGAAGTTTCACGGATCAATTACTATGGCTACAGGCTTTACCGTGCTCTTCCTTTTCTGTATGAACTGAGATGTGTACTTGATTGGTCCTGCACAGCGACATCACTGACTATGTATGACTGGCTCAAGTTGGAAGACGTAAATGCGAGTTTGTACCTTGTCAAATGCGATACAGTTTTAAATCGTGCTACACACAAACATGGAGAGAGGCAAACAAAAATGACTAAATGCTGCAACGGGATATGTCTGTTCTTCATCTTGTTATGCGTTATCTGGGCTCCTATGCTGATGTATAGCAGTGGTAACCCAACAAACATCGCCAATCCGATAAAAGATGCGAGCGTTCAGATTGATATAAAAACAGCTGGTGGAAAGCTTACTTTGTACCAAACAACCCTGTGCGAGAGAATTTCAGGGGATAACATTGATCTCGGGCTAGATCTCCGGTCCCAGAGCTTCTTGCCAACGTACAACAAAAATGACATCCAGCTGATAAGCTGCCAATCTGATGCAAGCGTTTTGTGGCTTGTCCCTGACACAGTTGTGACCAGATTCATTCAATCCCTTGACTGGGACACAGATATGGACATCACCTTTTCTTGGCTTCTTAACAGAGACCGACCTAAAGGTAAGGAGACTGTCAAGTACGAAAGAAGTGTGGACCCTCAGGACCTTCCAAAACGCTCTGAGGTGCAAATGGTTCTCAACGGCTCAATGGATGGATTTAGAGTGCATAACTTGTACCCAAAGTTTTTCCGTGTTACTGGTTCTGGTGATGTCAGGTCTTTTGAAGACCAGAAGGATGAAGTGAGTGCAGACATACTCATGAACCATGCAGATACCAAGTGGTGGTGGTCATTCCATAATCTTAAGGCGTCTGAAAATATTAGCGCTTGCGAGGGTATGAATGGACCAGTTGCTATCATAATGTCTGAGGAAACTCCCCCACAGGGGTTTCTGGGTGACACGCTCAGCAAATTCAGTATATGGGGACTCTATATAACATTTGTACTAGCAGTCGGGCGTTTCATCAGGCTTCAATGCTCTGACCTGCGTATGAGAATACCATACGAGAACCTCCCTTCGTGTGACAGATTAATAGCAATATGTGAGGACTTATACGCGGCGAGAGCAGAGGGTGAGCTTGGAGTAGAAGAAGTTCTATACTGGACCCTTGTGAAGATCTATAGATCTCCACACATGCTGCTTGAGTATACAAAGCTAGACTACGATGCTTAG

Protein:   MVSLFRAFRAASHLRVASCLLLPAVQLALGICNPSWVSLPFFVGSCAGLVDWSLTSNVSGLFRWWRVLYIYAAFNIVLLYLYQLPINFSDMIRWIASFIGLFRISAETEGTDICSGLFLLLFYTMLSYIRSDLEDMDFIMSTSENNLAERLLPPKYSFFIRESRAGVRHTNVLLRGAVFKTFSINFFTYGFLVSLFALSFWSFHFASLCAFGLLAYVGYIIYAFPSLFRLHRLNGLLLVFILLWAVSTYIFNVAFSFLNTKAGKDMKIWEMVGLWHYTIPGFFLLAQFGLGMLVALGNLVNNSVFLYLSEESSRSSNDRSYAEADEETKVLVVATIAWGLRKCSRAIMLALIFLIAMKPGFVHAVYVIFFLMYLLSHNINRKIRKSLILLCEVHFALLYILEIDLVSNSLKRQGSVSREILFQLGLLRSESSWDFLEIALLACFCAIHNHGFEVLFSFSAIVRHTPSPPIGFSILKAGLNKSVLLSVYSSPSSSYSQDNTTYERHIASFLSAIGQKFLSMYRSCGTYIAFITILISVYLVKPNYVSFGYIFLLLFWITGRQMFEETKRRLWFPLKAYAVLVFMFIYCLSSFVSFQLWLSGYIDLYFYLGYNSEAPLLDNVWESLAVLIVMQLYSYERRQNGHYIPGQSSLVHPGVFGFLERFLVWHGQKILFAALFYASLSPISVFGFVYLLGLVICTTFPKSSSVPSKSFLIYTGFLVSAEYLFQLWGMQAQMFPGQRYAELSFYLGLRVYEPGFWGIESGLRGKVLVVAACTLQYNVFRWLERTPGLTIMKGKYEEPCPLFVSAEDTTASVSSSNGETPSSIDHASISIKQGEATSNSWPFFSPRDNQAAGFLHPKTGGSESGSSKKFSFGHFWGSIKESHKWNKRRILALKKERFEMQKNLLNIYLKFWIENMFNLYGLEINMIALLLASFALLNAISLVYIALLAACVLLRRRLIQKLWPVVVFLFASILAIEYVATWNNLLPLDQDPSETSVHCHDCWSIAAVYLKFCRDCWLGVRVDDPRTLISYFVVFMLACFKLRADQISSFSESSTYHQMKSQRKNSFVWRDLSFETKSMWTVLDYLRLYCYVHLLDVVLILILITGTLEYDILHLGYLAFALVFARMRLEILKKKNKIFRFLRVYNFVLIIFSLAYQSPFVGNFNDGKCETVDYIYEVIGFYKYDYGFRITARSALVEIIIFMLVSLQSYMFSSQEFDYVSRYLEAEQIGAIVREQEKKAARKTEQLQQIREAEEKKRQRNLQVEKMKSEMLNLRVQLHRMNSDSNFGFASPRTEGLRRRSSYLIPDSGAASPEIDGVVHRKEGQPIDEDPHYPFEAHELPMSATPEAPDSPECSFGASPCEITEIQHNTDVMSTEREIKDKSEGKDNPLISAVQLIGDGVSQVQFIGNQAVNNLANFLNISPENSDINEQSSVDDEVYDEMESQNRIHKPFERSTSLQSDRSSDGTSFQIGRILRHIWSRMQSNNDIVCYCCFIIAFLWNFSLLSMVYLAALFLYALCVHTGPTHIFWVVMLMYTEIYILLQYLYQIIIQHCGLSIDAPLLQELGFPTQRIKSSFVVSSLPLFLVYISTLIQSVITVKDGDWVPSADFASRRNARGSQKDLTRINWSLRVWDVYKKLRDGVKLVIRSMYRYWISLTRGAESPPYFVQVTMDVHMWPEDGIQPERVECRMNQLLRLVHNERCEKGNPDLCPYSSRVHVQSIERSTETPNEALVVLEVEYASPTNGCSTAEWYKSLTPASDVAKEIRKAQHSGLGEGTGFPYPILSVIGGGKRETDLYAYIFGADLMVFFLVAIFYRSVIKNKSEFIDVYQLVDQFPFDFVIILMVIFFLIVVDRVIYLCSFATGKVVYYLFSLILFTYAVTEYAWSIYPTQQHAAGLALRFIFLAKAMSLALQAIQIRYGLPHKSTLYRQFLTSEVSRINYYGYRLYRALPFLYELRCVLDWSCTATSLTMYDWLKLEDVNASLYLVKCDTVLNRATHKHGERQTKMTKCCNGICLFFILLCVIWAPMLMYSSGNPTNIANPIKDASVQIDIKTAGGKLTLYQTTLCERISGDNIDLGLDLRSQSFLPTYNKNDIQLISCQSDASVLWLVPDTVVTRFIQSLDWDTDMDITFSWLLNRDRPKGKETVKYERSVDPQDLPKRSEVQMVLNGSMDGFRVHNLYPKFFRVTGSGDVRSFEDQKDEVSADILMNHADTKWWWSFHNLKASENISACEGMNGPVAIIMSEETPPQGFLGDTLSKFSIWGLYITFVLAVGRFIRLQCSDLRMRIPYENLPSCDRLIAICEDLYAARAEGELGVEEVLYWTLVKIYRSPHMLLEYTKLDYDA